Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951558.1_cds_XP_016491557.1_81860
CDS Infomation

[gene=LOC107811187] [db_xref=GeneID:107811187] [protein=polygalacturonase-like] [protein_id=XP_016491557.1] [location=complement(join(240..647,833..949,1275..1391,1843..1884,1975..2081,2152..2323,2482..2548,2712..2854,4885..4971))] [gbkey=CDS]
Sequence

ATGGTGGCAAAGGGTGGAGGACAGCAACTTCAGCGACAGTGGTGGCGGCGGACAACGGCT
CCGACGACAGGTTTAGCAGCGGCTCCGTGGAAGAACTTGGGCGTTGTTGGCAAGTTGCCC
CAACTTGAGGCCCTTCAACTATTTGACGCCGGCATTGGCAAGGAGTGGGAAGTAGTTGAG
GAAGGATTTCCTCAGTTAAAATTTTTGCAACTGAAATTTTTGGAAATTCGATTCAATATG
ACATTGAAGAAAACTACGGAGGTTCTATTGAGATCAGTATCAGTTAGACATGTACAGAGT
AACATCTACTTTGGCAACAGTGCTCAAACTCATATACTTATAGAGAAATGCAATGGATTC
AAAGTGGATAGTGTAATGATTGAATCTCCAGGAAATAGTCCAAATACTGATGGAATTCAC
ATTCAGTCTTCTCAATATGTGGCCATTACCAATTCTAAAATCAGCACTGGGGATGATTGC
ATTTCAATTGGAGATTATTCTTCTAATGTCCAAAGATACAACATTCAATGTGGACCAGGT
CATGGTATAAGGTTGTCTTCTCATCGGTGTTTTGCGTTTCTGCAACCCACTGGTCTGACT
AATCCAGATATCTACAGGTTTTTATCTTCTAAATCTGTAGGGAAAGGTGGTAATTTTGCT
CAAGTAGAGAACATTCATGTGAGCAATGCTTTCTTCTATGGAACTACAAATGGAGCTCGC
ATCAAGACATGGCAGGTTGGCAGAGGATATGTACGAGATGTCATATTTGAGAATCTTGAA
TTTAACTCAGTCAAGAATCCCATTATAATTGACCAGAATTATTGTGATGTTCGAGGAGCT
TGTAAGGAAATGGTAATTGGAGTGCAAATCAGCAATGTTATTTACCAGAATATATTTGGA
ACACCGAGCACAGCTATCGCCATAAAGCTGAACCGCAGTATGTCAGTGCCATGTATTGAT
ATAACAATGCAACTAATACAACTAACATCAGCGACAGCAGGAACAGCGACACCACTGCTT
ACTGTAGGAATGTTGATGGCCAAGAATATAGTATTGAACCTGGTCCTTGTATCTCAGAAT
ATTGAGATTTTTACTCTTTCTCAACACCTACATGATAGTGCTAACACCAACAGGCAACAA
TTCTTTGTTGTGTGCATAACCAGAAAAGGAAAGGAAAAGACCAACAAAATGAAACAAACT
TGTCAGTGTTGTAGCACAGTATTGTTGTACATTCAAATTTTTGTTTTGGCCTTGATTTAA

Peptide Sequence

PEP ID

XP_016491557.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MVAKGGGQQLQRQWWRRTTAPTTGLAAAPWKNLGVVGKLPQLEALQLFDAGIGKEWEVVE
EGFPQLKFLQLKFLEIRFNMTLKKTTEVLLRSVSVRHVQSNIYFGNSAQTHILIEKCNGF
KVDSVMIESPGNSPNTDGIHIQSSQYVAITNSKISTGDDCISIGDYSSNVQRYNIQCGPG
HGIRLSSHRCFAFLQPTGLTNPDIYRFLSSKSVGKGGNFAQVENIHVSNAFFYGTTNGAR
IKTWQVGRGYVRDVIFENLEFNSVKNPIIIDQNYCDVRGACKEMVIGVQISNVIYQNIFG
TPSTAIAIKLNRSMSVPCIDITMQLIQLTSATAGTATPLLTVGMLMAKNIVLNLVLVSQN
IEIFTLSQHLHDSANTNRQQFFVVCITRKGKEKTNKMKQTCQCCSTVLLYIQIFVLALI

Transcript Sequence

Gene sequence data has not been registered.